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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1252
ChIP-seq
1140
total RNA-seq
208
DNase-seq
120
ATAC-seq
103
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
5
Hi-C
1
GRO-seq
Assay category
208
DNA accessibility
Date released
187
June, 2019
9
November, 2018
8
October, 2019
3
August, 2017
1
November, 2020
Available data
208
bam
208
bed narrowPeak
208
bigBed narrowPeak
208
bigWig
205
bed broadPeak
205
bigBed broadPeak
204
bed bed3+
11
fastq
Organism
208
Homo sapiens
Biosample type
177
tissue
29
primary cell
2
cell line
in vitro differentiated cells
Organ
79
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
17
epithelium
11
vasculature
9
blood vessel
8
connective tissue
8
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
208
AMP
Genome assembly (visualization)
206
GRCh38
185
hg19
Lab
208
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
in vitro differentiated cells
month_released!
March, 2020
target.investigated_as!
control
BIOSAMPLE
ASSAY
208 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 40 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
skeletal muscle myoblast
2
+ See 18 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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