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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
ChIP-seq
109
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
4
Hi-C
4
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
DNase-seq
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA accessibility
Date released
1
October, 2019
Available data
1
bam
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
Organism
1
Homo sapiens
Biosample type
110
tissue
19
primary cell
1
cell line
1
in vitro differentiated cells
Organ
1
epithelium
kidney
1
pancreas
Project
1
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
1
AMP-T2D consortium
files.file_type!
zippedFastqFolder
organ_slims!
kidney
BIOSAMPLE
ASSAY
1 results
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DNase-seq
cell line
Panc1
1
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