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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 484ChIP-seq
  • 113total RNA-seq
  • 29ATAC-seq
  • 6MeRIP-seq
  • 6pCHi-C
  • 5STARR-seq
  • 4Hi-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 2Capture-C
  • 2DNase-seq
  • 2HiChIP
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1MPRA
  • 1WGBS
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 2DNA accessibility
Date released
  • 2October, 2019
Available data
  • 2bam
  • 2bed narrowPeak
  • 2bigBed narrowPeak
  • 2bigWig
  • 1bed bed3+
  • 1bed broadPeak
  • 1bigBed broadPeak
Organism
  • 2Homo sapiens
Biosample type
  • 178tissue
  • 31primary cell
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 1epithelium
  • 1kidney
  • 1pancreas
Project
  • 2AMP
Genome assembly (visualization)
  • 2GRCh38
  • 2hg19
Lab
  • 2AMP-T2D consortium
BIOSAMPLE
ASSAY

2 results

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DNase-seq
cell line
Panc11
glomerular visceral epithelial cell1
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