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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 279ChIP-seq
  • 247total RNA-seq
  • 200ATAC-seq
  • 187single cell RNA-seq
  • 56snATAC-seq
  • 47WGBS
  • 31DNase-seq
  • 17pCHi-C
  • 10Hi-C
  • 10RRBS
  • 2small RNA-seq
  • 1DNAme array
  • 1FAIRE-seq
Assay category
  • 31DNA accessibility
Date released
  • 24June, 2019
  • 4October, 2019
  • 2August, 2017
  • 1November, 2020
Available data
  • 29bam
  • 29bed narrowPeak
  • 29bigBed narrowPeak
  • 29bigWig
  • 28bed broadPeak
  • 28bigBed broadPeak
  • 27bed bed3+
  • 1fastq
Organism
  • 31Homo sapiens
Biosample type
  • 178tissue
  • 31primary cell
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 18epithelium
  • 12kidney
  • 6connective tissue
  • 6vasculature
  • 5brain
  • 4blood vessel
  • 3heart
  • 2liver
  • 2vein
  • 1eye
  • 1musculature of body
Project
  • 31AMP
Genome assembly (visualization)
  • 27GRCh38
  • 22hg19
Lab
  • 31AMP-T2D consortium
Audit category:
  • 3inconsistent ontology term
BIOSAMPLE
ASSAY

31 results

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DNase-seq
primary cell
cardiac fibroblast3
kidney tubule cell3
endothelial cell of umbilical vein2
glomerular visceral epithelial cell2
kidney glomerular epithelial cell2
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