Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
856
total RNA-seq
619
ChIP-seq
164
DNase-seq
105
single cell RNA-seq
87
RNA microarray
85
ATAC-seq
24
pCHi-C
17
WGBS
16
small RNA-seq
13
Hi-C
8
RRBS
3
snDrop-seq
2
FAIRE-seq
2
snATAC-seq
Assay category
164
DNA accessibility
Date released
161
June, 2019
2
October, 2019
1
August, 2017
Available data
173
bam
173
bed narrowPeak
173
bigBed narrowPeak
173
bigWig
172
bed bed3+
172
bed broadPeak
172
bigBed broadPeak
fastq
Organism
164
Homo sapiens
Biosample type
164
tissue
30
primary cell
2
cell line
Organ
68
kidney
36
limb
32
musculature of body
27
heart
25
brain
18
ureter
5
blood vessel
5
vasculature
artery
4
pancreas
3
eye
2
nerve
1
adipose tissue
1
connective tissue
1
liver
Project
164
AMP
Genome assembly (visualization)
163
GRCh38
147
hg19
Lab
164
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
organ_slims!
artery
BIOSAMPLE
ASSAY
164 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 35 more…
See all biosamples
Download