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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1024
total RNA-seq
841
ChIP-seq
250
ATAC-seq
180
single cell RNA-seq
142
DNase-seq
87
RNA microarray
28
snATAC-seq
26
WGBS
25
pCHi-C
16
small RNA-seq
12
Hi-C
11
RRBS
4
FAIRE-seq
3
snDrop-seq
Assay category
142
DNA accessibility
Date released
131
June, 2019
9
November, 2018
2
August, 2017
Available data
141
bam
141
bed narrowPeak
141
bigBed narrowPeak
141
bigWig
140
bed bed3+
140
bed broadPeak
140
bigBed broadPeak
10
fastq
Organism
142
Homo sapiens
Biosample type
142
tissue
31
primary cell
2
cell line
1
in vitro differentiated cells
Organ
68
kidney
limb
32
musculature of body
27
brain
27
heart
18
ureter
7
pancreas
5
blood vessel
5
vasculature
4
artery
4
liver
3
eye
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
142
AMP
Genome assembly (visualization)
141
GRCh38
125
hg19
Lab
142
AMP-T2D consortium
lab.title!
Mark McCarthy, Oxford
Rohit N. Kulkarni, M.D., Ph.D.
organ_slims!
limb
BIOSAMPLE
ASSAY
142 results
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DNase-seq
tissue
heart
18
brain
14
kidney
13
renal cortex interstitium
11
renal pelvis
10
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