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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1030
total RNA-seq
897
ChIP-seq
247
ATAC-seq
177
single cell RNA-seq
169
DNase-seq
87
RNA microarray
28
snATAC-seq
25
pCHi-C
21
WGBS
16
Hi-C
16
small RNA-seq
11
RRBS
4
MeRIP-seq
3
FAIRE-seq
3
snDrop-seq
Assay category
169
DNA accessibility
Date released
163
June, 2019
November, 2018
4
October, 2019
2
August, 2017
Available data
168
bam
168
bed narrowPeak
168
bigBed narrowPeak
168
bigWig
167
bed bed3+
167
bed broadPeak
167
bigBed broadPeak
1
fastq
Organism
169
Homo sapiens
Biosample type
169
tissue
31
primary cell
2
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
heart
25
brain
18
ureter
5
blood vessel
5
pancreas
5
vasculature
4
artery
3
eye
2
nerve
1
adipose tissue
1
connective tissue
1
liver
Project
169
AMP
Genome assembly (visualization)
168
GRCh38
152
hg19
Lab
169
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
lab.title!
Mark McCarthy, Oxford
month_released!
May, 2023
November, 2018
BIOSAMPLE
ASSAY
169 results
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DNase-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
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