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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
634
total RNA-seq
254
ATAC-seq
238
ChIP-seq
180
single cell RNA-seq
176
DNase-seq
86
RNA microarray
28
snATAC-seq
24
pCHi-C
21
WGBS
16
Hi-C
14
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
176
DNA accessibility
Date released
162
June, 2019
8
November, 2018
4
October, 2019
2
August, 2017
Available data
175
bam
175
bed narrowPeak
175
bigBed narrowPeak
175
bigWig
174
bed bed3+
174
bed broadPeak
174
bigBed broadPeak
9
fastq
Organism
176
Homo sapiens
Biosample type
176
tissue
31
primary cell
2
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
7
pancreas
5
blood vessel
5
vasculature
4
artery
4
liver
3
eye
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
176
AMP
Genome assembly (visualization)
175
GRCh38
159
hg19
Lab
176
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
adipose tissue
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
176 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
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