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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1031total RNA-seq
  • 907ChIP-seq
  • 260ATAC-seq
  • 180single cell RNA-seq
  • 178DNase-seq
  • 87RNA microarray
  • 28snATAC-seq
  • 27WGBS
  • 25pCHi-C
  • 16Hi-C
  • 16small RNA-seq
  • 11RRBS
  • 4FAIRE-seq
  • 4MeRIP-seq
  • 3snDrop-seq
Assay category
  • 178DNA accessibility
Date released
  • 163June, 2019
  • 9November, 2018
  • 4October, 2019
  • 2August, 2017
Available data
  • 177bam
  • 177bed narrowPeak
  • 177bigBed narrowPeak
  • 177bigWig
  • 176bed bed3+
  • 176bed broadPeak
  • 176bigBed broadPeak
  • 10fastq
Organism
  • 178Homo sapiens
Biosample type
  • 178tissue
  • 31primary cell
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 68kidney
  • 36limb
  • 32musculature of body
  • 27brain
  • 27heart
  • 18ureter
  • 7pancreas
  • 5blood vessel
  • 5vasculature
  • 4artery
  • 4liver
  • 3eye
  • 2adipose tissue
  • 2connective tissue
  • 2nerve
  • 1spleen
Project
  • 178AMP
Genome assembly (visualization)
  • 177GRCh38
  • 161hg19
Lab
  • 178AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

178 results

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DNase-seq
tissue
heart18
muscle of arm17
brain14
kidney13
muscle of leg13
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