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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
109
ChIP-seq
103
ATAC-seq
70
single cell RNA-seq
47
WGBS
6
MeRIP-seq
6
RRBS
4
Hi-C
3
DNase-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
Assay category
3
DNA accessibility
Date released
3
October, 2019
Available data
15
bam
15
bed narrowPeak
15
bigBed narrowPeak
15
bigWig
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Organ
3
epithelium
3
kidney
1
connective tissue
1
liver
1
pancreas
Project
3
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
3
AMP-T2D consortium
files.file_type!
bed bed3+
organ_slims!
vein
BIOSAMPLE
ASSAY
3 results
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DNase-seq
primary cell
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
glomerular visceral epithelial cell
1
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