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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
DNase-seq
51
ChIP-seq
5
Hi-C
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
168
DNA accessibility
Date released
155
June, 2019
9
November, 2018
3
October, 2019
1
November, 2020
Available data
173
bam
173
bed narrowPeak
173
bigBed narrowPeak
173
bigWig
170
bed broadPeak
170
bigBed broadPeak
168
bed bed3+
12
fastq
Organism
168
Homo sapiens
Biosample type
140
tissue
27
primary cell
1
cell line
Organ
78
kidney
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
8
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
168
AMP
Genome assembly (visualization)
168
GRCh38
145
hg19
Lab
168
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
ibed
organ_slims!
limb
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
168 results
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DNase-seq
tissue
heart
18
brain
14
kidney
13
renal cortex interstitium
11
renal pelvis
10
+ See 33 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
See all biosamples
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