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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1135
total RNA-seq
664
ChIP-seq
164
DNase-seq
93
ATAC-seq
16
small RNA-seq
14
RRBS
8
single cell RNA-seq
7
WGBS
5
Hi-C
3
FAIRE-seq
Assay category
164
DNA accessibility
Date released
154
June, 2019
8
October, 2019
1
August, 2017
1
November, 2020
Available data
176
bam
176
bed narrowPeak
176
bigBed narrowPeak
176
bigWig
173
bed broadPeak
173
bigBed broadPeak
171
bed bed3+
fastq
0
bigBed bedMethyl
Organism
164
Homo sapiens
Biosample type
135
tissue
27
primary cell
2
cell line
Organ
79
kidney
36
limb
musculature of body
30
brain
30
heart
18
ureter
17
epithelium
11
vasculature
9
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
2
liver
2
nerve
2
vein
1
adipose tissue
Project
164
AMP
Genome assembly (visualization)
163
GRCh38
141
hg19
Lab
164
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
fastq
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
164 results
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DNase-seq
tissue
heart
18
kidney
13
brain
12
renal cortex interstitium
11
renal pelvis
10
+ See 32 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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