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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
459
total RNA-seq
110
ChIP-seq
52
ATAC-seq
13
DNase-seq
8
WGBS
6
single cell RNA-seq
5
Hi-C
3
pCHi-C
3
small RNA-seq
1
FAIRE-seq
1
RNA microarray
1
RRBS
Assay category
13
DNA accessibility
Date released
8
June, 2019
4
October, 2019
1
November, 2018
Available data
13
bam
13
bed bed3+
13
bed broadPeak
13
bed narrowPeak
13
bigBed broadPeak
13
bigBed narrowPeak
13
bigWig
1
fastq
Organism
13
Homo sapiens
Biosample type
7
tissue
6
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
13
AMP
Genome assembly (visualization)
13
GRCh38
12
hg19
Lab
13
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
May, 2020
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
13 results
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DNase-seq
tissue
coronary artery
2
omental fat pad
2
tibial artery
2
ascending aorta
1
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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