Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
618
ChIP-seq
196
total RNA-seq
42
DNase-seq
31
ATAC-seq
8
Hi-C
6
WGBS
4
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
42
DNA accessibility
Date released
34
June, 2019
4
October, 2019
3
November, 2018
1
August, 2017
Available data
41
bam
41
bed bed3+
41
bed broadPeak
41
bed narrowPeak
41
bigBed broadPeak
41
bigBed narrowPeak
41
bigWig
3
fastq
Organism
42
Homo sapiens
Biosample type
40
tissue
2
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
0
bone marrow
Project
42
AMP
Genome assembly (visualization)
41
GRCh38
41
hg19
Lab
42
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
42 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
muscle of arm
17
muscle of leg
13
liver
2
right lobe of liver
2
tibial artery
2
+ See 3 more…
primary cell
hepatic stellate cell
1
hepatocyte
1
See all biosamples
Download