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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
0
FAIRE-seq
0
MeRIP-seq
Assay category
73
Transcription
8
DNA methylation
Date released
52
February, 2021
19
July, 2019
3
February, 2020
3
May, 2021
2
March, 2020
2
October, 2019
Available data
76
bam
76
bigWig
73
tsv
6
bed bedMethyl
6
bigBed bedMethyl
Organism
81
Homo sapiens
Biosample type
52
cell line
24
tissue
4
primary cell
1
in vitro differentiated cells
Organ
483
connective tissue
462
pancreas
407
adipose tissue
197
liver
185
epithelium
81
heart
64
blood vessel
64
vasculature
62
bone element
62
kidney
56
artery
22
brain
19
eye
14
embryo
9
musculature of body
8
limb
5
nerve
4
skeleton
2
spleen
1
pericardium
1
spinal cord
1
vein
Project
81
AMP
Genome assembly (visualization)
76
GRCh38
70
hg19
Lab
81
AMP-T2D consortium
BIOSAMPLE
ASSAY
81 results
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total RNA-seq
WGBS
small RNA-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
heart left ventricle
3
4
heart
4
1
1
heart right ventricle
1
2
right atrium auricular region
3
cardiac atrium
1
+ See 4 more…
primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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