Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1390
ChIP-seq
1278
total RNA-seq
209
DNase-seq
136
ATAC-seq
106
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
5
GRO-seq
5
Hi-C
Assay category
17
DNA methylation
5
DNA accessibility
Date released
10
July, 2019
8
November, 2018
3
August, 2017
1
October, 2019
Available data
41
zippedFastqFolder
23
bam
22
bigWig
19
fastq
17
bed bedMethyl
17
bigBed bedMethyl
6
tsv
5
bed narrowPeak
5
bigBed narrowPeak
1
tar
Organism
22
Homo sapiens
Biosample type
20
tissue
1
cell line
1
primary cell
Organ
6
heart
6
pancreas
2
adipose tissue
2
blood vessel
2
connective tissue
2
spleen
2
vasculature
1
brain
1
epithelium
1
kidney
1
limb
1
liver
1
musculature of body
1
vein
Project
22
AMP
Genome assembly (visualization)
17
GRCh38
5
hg19
Lab
22
AMP-T2D consortium
assay_title!
whole genome sequencing assay
files.file_type!
ibed
BIOSAMPLE
ASSAY
22 results
search-icon
table-tab-icon
Clear Filters
WGBS
FAIRE-seq
tissue
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart left ventricle
2
heart right ventricle
2
+ See 8 more…
cell line
HepG2
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
Download