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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1561
ChIP-seq
1278
total RNA-seq
176
DNase-seq
175
ATAC-seq
106
single cell RNA-seq
17
WGBS
16
small RNA-seq
5
FAIRE-seq
1
pCHi-C
Assay category
17
DNA methylation
5
DNA accessibility
Date released
10
July, 2019
8
November, 2018
3
August, 2017
1
October, 2019
Available data
41
zippedFastqFolder
22
bam
21
bigWig
19
fastq
16
bed bedMethyl
16
bigBed bedMethyl
6
tsv
5
bed narrowPeak
5
bigBed narrowPeak
1
tar
Organism
22
Homo sapiens
Biosample type
20
tissue
1
cell line
1
primary cell
Organ
6
heart
6
pancreas
3
blood vessel
3
vasculature
2
adipose tissue
2
connective tissue
2
spleen
1
brain
1
epithelium
1
kidney
1
limb
1
liver
musculature of body
1
vein
Project
22
AMP
Genome assembly (visualization)
16
GRCh38
5
hg19
Lab
22
AMP-T2D consortium
files.file_type!
hic
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
22 results
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WGBS
FAIRE-seq
tissue
pancreas
2
1
adipose tissue
2
aorta
2
body of pancreas
2
heart left ventricle
2
+ See 7 more…
cell line
HepG2
1
primary cell
endothelial cell of umbilical vein
1
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