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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1578
ChIP-seq
1282
total RNA-seq
214
ATAC-seq
209
DNase-seq
158
single cell RNA-seq
59
WGBS
21
snATAC-seq
18
small RNA-seq
5
FAIRE-seq
1
pCHi-C
Assay category
59
DNA methylation
5
DNA accessibility
Date released
41
May, 2022
11
July, 2019
8
November, 2018
3
August, 2017
1
October, 2019
Available data
41
zippedFastqFolder
23
bam
22
bigWig
19
fastq
17
bed bedMethyl
17
bigBed bedMethyl
6
tsv
5
bed narrowPeak
5
bigBed narrowPeak
1
tar
Organism
64
Homo sapiens
Biosample type
42
primary cell
21
tissue
1
cell line
Organ
47
pancreas
42
epithelium
6
heart
3
blood vessel
3
vasculature
2
adipose tissue
2
connective tissue
2
spleen
1
brain
1
kidney
1
limb
1
liver
1
musculature of body
1
vein
Project
41
HPAP
23
AMP
Genome assembly (visualization)
17
GRCh38
5
hg19
Lab
41
Klaus Kaestner, Upenn
23
AMP-T2D consortium
files.file_type!
hic
BIOSAMPLE
ASSAY
64 results
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WGBS
FAIRE-seq
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
endothelial cell of umbilical vein
1
tissue
pancreas
2
1
adipose tissue
2
aorta
2
body of pancreas
2
heart left ventricle
2
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cell line
HepG2
1
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