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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
total RNA-seq
102
ATAC-seq
89
ChIP-seq
70
single cell RNA-seq
47
WGBS
18
DNase-seq
7
Hi-C
6
MeRIP-seq
5
RRBS
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
70
Transcription
1
DNA accessibility
Date released
33
April, 2018
33
July, 2018
3
August, 2018
1
June, 2018
1
October, 2019
Available data
71
bam
71
bigWig
70
tsv
66
fastq
1
bed narrowPeak
1
bigBed narrowPeak
1
tar
Organism
71
Homo sapiens
Biosample type
71
primary cell
Organ
93
heart
82
pancreas
71
epithelium
65
kidney
9
lung
7
blood vessel
7
vasculature
4
brain
4
connective tissue
2
artery
liver
1
musculature of body
1
vein
Project
71
AMP
Genome assembly (visualization)
71
hg19
70
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
liver
BIOSAMPLE
ASSAY
71 results
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single cell RNA-seq
FAIRE-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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