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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
283
total RNA-seq
153
ChIP-seq
62
ATAC-seq
14
single cell RNA-seq
11
snATAC-seq
5
Hi-C
4
MeRIP-seq
4
WGBS
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
DNase-seq
1
pCHi-C
Assay category
14
Transcription
2
DNA accessibility
Date released
8
April, 2018
6
July, 2018
1
August, 2017
1
November, 2018
Available data
16
bam
16
bigWig
15
fastq
14
tsv
2
bed narrowPeak
2
bigBed narrowPeak
Organism
16
Homo sapiens
Biosample type
8
primary cell
8
tissue
Organ
93
heart
82
pancreas
epithelium
65
kidney
9
lung
7
blood vessel
7
vasculature
4
brain
4
connective tissue
2
artery
1
liver
1
musculature of body
1
vein
Project
16
AMP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
bigBed broadPeak
organ_slims!
epithelium
BIOSAMPLE
ASSAY
16 results
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single cell RNA-seq
FAIRE-seq
primary cell
pancreatic stellate cell
4
co-expressing pancreatic endocrine cell
2
unclassified pancreatic endocrine cell
2
tissue
islet of Langerhans
6
1
pancreas
1
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