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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1871
ChIP-seq
1527
total RNA-seq
531
ATAC-seq
361
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
5
DNA accessibility
Date released
2
July, 2019
1
August, 2017
1
November, 2018
1
October, 2019
Available data
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
2
fastq
1
tar
Organism
5
Homo sapiens
Biosample type
4
tissue
1
primary cell
Organ
2
pancreas
1
blood vessel
1
brain
1
epithelium
1
kidney
1
vasculature
1
vein
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
5
AMP-T2D consortium
files.file_type!
csv
BIOSAMPLE
ASSAY
5 results
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FAIRE-seq
tissue
frontal cortex
1
islet of Langerhans
1
kidney
1
pancreas
1
primary cell
endothelial cell of umbilical vein
1
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