Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 755ChIP-seq
  • 241total RNA-seq
  • 195ATAC-seq
  • 95single cell RNA-seq
  • 49DNase-seq
  • 49pCHi-C
  • 19Hi-C
  • 19RRBS
  • 12snATAC-seq
  • 11small RNA-seq
  • 10MeRIP-seq
  • 8WGBS
  • 4FAIRE-seq
  • 4STARR-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 2Capture-C
  • 2snDrop-seq
  • 1DNAme array
Assay category
  • 4DNA accessibility
Date released
  • 2July, 2019
  • 1November, 2018
  • 1October, 2019
Available data
  • 4bam
  • 4bed narrowPeak
  • 4bigBed narrowPeak
  • 4bigWig
  • 1fastq
  • 1tar
Organism
  • 4Homo sapiens
Biosample type
  • 3tissue
  • 1primary cell
Organ
  • 1blood vessel
  • 1brain
  • 1epithelium
  • 1kidney
  • 1pancreas
  • 1vasculature
  • 1vein
Project
  • 4AMP
Genome assembly (visualization)
  • 4hg19
Lab
  • 4AMP-T2D consortium
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

4 results

search-icontable-tab-icon
Clear Filters
FAIRE-seq
tissue
frontal cortex1
kidney1
pancreas1
primary cell
endothelial cell of umbilical vein1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego