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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1674
ChIP-seq
1338
total RNA-seq
414
ATAC-seq
263
single cell RNA-seq
212
DNase-seq
86
RNA microarray
75
WGBS
60
snATAC-seq
pCHi-C
31
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Date released
5
January, 2018
Available data
5
bigWig
5
fastq
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
stem cell
Organ
1
embryo
Project
5
AMP
Genome assembly (visualization)
5
hg18
Lab
5
AMP-T2D consortium
assay_title!
pCHi-C
lab.title!
Kyle Gaulton, UCSD
month_released!
August, 2020
August, 2021
BIOSAMPLE
ASSAY
5 results
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GRO-seq
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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