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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1078
total RNA-seq
865
ChIP-seq
300
ATAC-seq
182
single cell RNA-seq
176
DNase-seq
87
RNA microarray
34
pCHi-C
28
snATAC-seq
20
Hi-C
18
WGBS
16
small RNA-seq
6
RRBS
5
GRO-seq
4
MeRIP-seq
3
FAIRE-seq
3
snDrop-seq
2
Capture-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
Target of assay
2
control
2
nucleotide modification
Date released
5
January, 2018
4
November, 2020
Available data
5
bigWig
5
fastq
Organism
9
Homo sapiens
Biosample type
cell line
4
in vitro differentiated cells
4
tissue
1
stem cell
Organ
4
pancreas
1
embryo
Project
9
AMP
Genome assembly (visualization)
5
hg18
Lab
5
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
biosample_type!
cell line
primary cell
month_released!
August, 2017
BIOSAMPLE
ASSAY
9 results
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GRO-seq
MeRIP-seq
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
4
stem cell
hESC
1
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