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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1703
ChIP-seq
1048
total RNA-seq
499
ATAC-seq
362
single cell RNA-seq
203
DNase-seq
84
RNA microarray
84
snATAC-seq
69
WGBS
52
pCHi-C
33
Hi-C
20
RRBS
15
small RNA-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
5
January, 2018
Available data
5
bigWig
5
fastq
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
stem cell
Organ
1
embryo
Project
5
AMP
Genome assembly (visualization)
5
hg18
Lab
5
AMP-T2D consortium
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
month_released!
December, 2019
October, 2017
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
5 results
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GRO-seq
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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