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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1338
total RNA-seq
508
ATAC-seq
405
ChIP-seq
368
single cell RNA-seq
206
DNase-seq
87
RNA microarray
84
snATAC-seq
70
WGBS
53
pCHi-C
30
Hi-C
19
RRBS
15
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Date released
5
January, 2018
Available data
5
bigWig
5
fastq
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
stem cell
Organ
1
embryo
Project
5
AMP
Genome assembly (visualization)
5
hg18
Lab
5
AMP-T2D consortium
organ_slims!
liver
ovary
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
5 results
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GRO-seq
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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