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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
276
ChIP-seq
245
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
WGBS
16
pCHi-C
10
RRBS
6
Hi-C
4
DNase-seq
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
6
3D chromatin structure
Date released
3
October, 2022
1
March, 2020
1
March, 2023
1
October, 2019
Available data
6
hic
bed bed3+
4
bedpe bed3+
4
bigWig
4
hdf5
3
cool
Organism
6
Homo sapiens
Biosample type
16
tissue
6
primary cell
4
in vitro differentiated cells
3
cell line
Organ
5
epithelium
3
pancreas
2
blood vessel
2
vasculature
2
vein
Project
3
HPAP
2
AMP
1
ITG
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
1
ITG
Audit category:
4
audit script error
assay_title!
WGBS
files.file_type!
bed bed3+
bed bedgraph
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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