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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
4
3D chromatin structure
Date released
2
March, 2020
1
August, 2021
1
December, 2018
1
February, 2021
1
July, 2019
1
May, 2020
Available data
2
bed bed3+
2
bedpe bed3+
2
hic
2
tsv
1
bigWig
1
fastq
1
hdf5
Organism
7
Homo sapiens
Biosample type
4
cell line
2
tissue
1
primary cell
Organ
10
pancreas
8
epithelium
7
liver
7
musculature of body
6
blood vessel
6
connective tissue
6
heart
6
vasculature
5
brain
4
eye
limb
3
kidney
2
adipose tissue
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
7
AMP
Genome assembly (visualization)
4
hg19
Lab
6
AMP-T2D consortium
1
Bing Ren, UCSD
organ_slims!
limb
BIOSAMPLE
ASSAY
7 results
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Hi-C
pCHi-C
cell line
HepG2
2
2
tissue
liver
1
1
primary cell
endothelial cell of hepatic sinusoid
1
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