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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
189
Transcription
4
3D chromatin structure
Date released
143
May, 2020
20
May, 2022
10
August, 2021
5
December, 2019
5
January, 2019
5
July, 2019
2
March, 2020
1
December, 2018
1
February, 2020
1
October, 2019
Available data
169
tsv
160
bigWig
159
bam
6
fastq
2
bedpe bed3+
2
hic
1
bed bed3+
1
hdf5
Organism
193
Homo sapiens
Biosample type
171
tissue
16
cell line
6
primary cell
Organ
475
connective tissue
406
pancreas
398
adipose tissue
193
liver
139
epithelium
75
heart
66
blood vessel
66
vasculature
62
bone element
61
kidney
56
artery
20
brain
19
eye
14
embryo
12
musculature of body
11
limb
5
nerve
4
skeleton
2
vein
1
pericardium
1
spinal cord
Project
193
AMP
Genome assembly (visualization)
162
hg19
159
GRCh38
Lab
163
AMP-T2D consortium
20
Karen Mohlke, UNC
10
Bing Ren, UCSD
assay_title!
snDrop-seq
BIOSAMPLE
ASSAY
193 results
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total RNA-seq
Hi-C
tissue
liver
167
1
right lobe of liver
3
cell line
HepG2
14
2
primary cell
hepatocyte
5
endothelial cell of hepatic sinusoid
1
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