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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
4
Hi-C
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
4
3D chromatin structure
2
Transcription
Date released
4
July, 2019
2
May, 2021
Available data
99
fastq
59
txt
39
tsv
22
hic
20
bedpe bed3+
6
bam
6
bed bed3+
6
bigWig
4
hdf5
3
cool
1
bedpe
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
6
AMP
Genome assembly (visualization)
7
hg19
GRCh38
Lab
4
AMP-T2D consortium
2
Kyle Gaulton, UCSD
assembly!
GRCh38
month_released!
March, 2023
BIOSAMPLE
ASSAY
6 results
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Hi-C
total RNA-seq
primary cell
CD8-positive, alpha-beta T cell
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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