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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
DNase-seq
53
ChIP-seq
4
ATAC-seq
4
Hi-C
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
4
3D chromatin structure
2
Transcription
Date released
4
July, 2019
2
May, 2021
October, 2019
Available data
1299
tsv
1266
bam
1266
bigWig
238
fastq
59
txt
18
hic
17
bedpe bed3+
6
bed bed3+
4
hdf5
3
cool
1
bedpe
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
4
AMP-T2D consortium
2
Kyle Gaulton, UCSD
month_released!
March, 2023
October, 2019
BIOSAMPLE
ASSAY
6 results
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Hi-C
total RNA-seq
primary cell
CD8-positive, alpha-beta T cell
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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