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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1385
ChIP-seq
1278
total RNA-seq
209
DNase-seq
136
ATAC-seq
106
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
5
GRO-seq
5
Hi-C
0
whole genome sequencing assay
Assay category
5
3D chromatin structure
Date released
4
July, 2019
1
October, 2019
Available data
23
hic
20
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
3
cool
1
bedpe
1
fastq
1
vcf
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
1
pancreas
Project
5
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent assembly
target.investigated_as!
other context
BIOSAMPLE
ASSAY
5 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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