Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
RRBS
6
Hi-C
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
6
3D chromatin structure
Date released
3
October, 2022
1
March, 2020
1
March, 2023
1
October, 2019
Available data
6
hic
4
bed bed3+
4
bedpe bed3+
4
bigWig
hdf5
3
cool
Organism
6
Homo sapiens
Biosample type
16
tissue
6
primary cell
4
in vitro differentiated cells
3
cell line
Organ
5
epithelium
3
pancreas
2
blood vessel
2
vasculature
2
vein
Project
3
HPAP
2
AMP
1
ITG
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
1
ITG
Audit category:
4
audit script error
biosample_type!
stem cell
files.file_type!
hdf5
BIOSAMPLE
ASSAY
6 results
search-icon
table-tab-icon
Clear Filters
Hi-C
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
Download