Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1031total RNA-seq
  • 907ChIP-seq
  • 260ATAC-seq
  • 180single cell RNA-seq
  • 178DNase-seq
  • 87RNA microarray
  • 28snATAC-seq
  • 27WGBS
  • 25pCHi-C
  • 16Hi-C
  • 16small RNA-seq
  • 11RRBS
  • 4FAIRE-seq
  • 4MeRIP-seq
  • 3snDrop-seq
Assay category
  • 163D chromatin structure
Date released
  • 7March, 2020
  • 4July, 2019
  • 2August, 2021
  • 1March, 2019
  • 1November, 2019
  • 1October, 2019
Available data
  • 11hic
  • 10bedpe bed3+
  • 1bedpe
Organism
  • 16Homo sapiens
Biosample type
  • 16tissue
  • 10primary cell
  • 4cell line
  • 4in vitro differentiated cells
Organ
  • 6musculature of body
  • 4limb
  • 4pancreas
  • 3heart
  • 1blood vessel
  • 1kidney
  • 1liver
  • 1vasculature
Project
  • 16AMP
Genome assembly (visualization)
  • 11hg19
Lab
  • 13AMP-T2D consortium
  • 2Bing Ren, UCSD
  • 1Katalin Susztak, Upenn
BIOSAMPLE
ASSAY

16 results

search-icontable-tab-icon
Clear Filters
Hi-C
tissue
gastrocnemius medialis4
islet of Langerhans3
psoas muscle2
aorta1
heart1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego