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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
30
total RNA-seq
21
ATAC-seq
6
DNase-seq
4
Hi-C
4
pCHi-C
Assay category
4
3D chromatin structure
Date released
8
March, 2020
6
July, 2019
4
October, 2019
3
August, 2021
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Available data
3
bedpe bed3+
3
hic
1
bed bed3+
1
bigWig
1
hdf5
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
1
tissue
Organ
1
blood vessel
1
epithelium
1
heart
1
pancreas
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
May, 2021
organ_slims!
vasculature
target.investigated_as!
histone
BIOSAMPLE
ASSAY
4 results
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Hi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
tissue
heart
1
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