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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 190total RNA-seq
  • 181ChIP-seq
  • 105ATAC-seq
  • 89single cell RNA-seq
  • 28pCHi-C
  • 27DNase-seq
  • 11small RNA-seq
  • 9Hi-C
  • 5snATAC-seq
  • 4MeRIP-seq
  • 3FAIRE-seq
  • 2Capture-C
  • 2snDrop-seq
  • 1DNAme array
Assay category
  • 93D chromatin structure
Date released
  • 3October, 2022
  • 2March, 2020
  • 1August, 2021
  • 1March, 2019
  • 1March, 2023
  • 1October, 2019
Available data
  • 8hic
  • 7bedpe bed3+
  • 3cool
  • 1bedpe
Organism
  • 9Homo sapiens
Biosample type
  • 5primary cell
  • 4tissue
Organ
  • 6pancreas
  • 4epithelium
  • 1blood vessel
  • 1heart
  • 1vasculature
  • 1vein
Project
  • 5AMP
  • 3HPAP
  • 1ITG
Genome assembly (visualization)
  • 7hg19
  • 1GRCh38
Lab
  • 3AMP-T2D consortium
  • 3Klaus Kaestner, Upenn
  • 2Bing Ren, UCSD
  • 1ITG
Audit category:
  • 3audit script error
BIOSAMPLE
ASSAY

9 results

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Hi-C
primary cell
chondrocytes1
endothelial cell of umbilical vein1
pancreatic acinar cell1
pancreatic alpha cell1
pancreatic beta cell1
tissue
islet of Langerhans2
heart1
pancreas1
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