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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1713
ChIP-seq
1466
total RNA-seq
485
ATAC-seq
363
single cell RNA-seq
201
DNase-seq
87
RNA microarray
84
snATAC-seq
73
WGBS
56
pCHi-C
29
Hi-C
20
RRBS
18
small RNA-seq
5
GRO-seq
5
MeRIP-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
2
February, 2023
Organism
2
Homo sapiens
Biosample type
2
cell line
Project
2
T1D
Lab
2
Kyle Gaulton, UCSD
assay_title!
CRISPR genome editing followed by sgRNA sequencing
audit.WARNING.category!
inconsistent control read length
organ_slims!
vasculature
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
2 results
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HiChIP
cell line
EndoC_BH1
2