Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1764
ChIP-seq
1453
total RNA-seq
454
ATAC-seq
263
single cell RNA-seq
212
DNase-seq
86
RNA microarray
75
WGBS
70
snATAC-seq
56
pCHi-C
31
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
18
Transcription
Date released
18
July, 2019
2
February, 2023
Available data
18
bam
18
bigWig
18
tsv
Organism
20
Homo sapiens
Biosample type
16
tissue
2
cell line
2
primary cell
Organ
4
brain
3
adipose tissue
3
connective tissue
3
liver
2
musculature of body
2
pancreas
1
heart
1
kidney
Project
18
AMP
2
T1D
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
18
AMP-T2D consortium
2
Kyle Gaulton, UCSD
month_released!
August, 2021
organ_slims!
bodily fluid
ovary
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
HiChIP
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 9 more…
cell line
EndoC_BH1
2
primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
See all biosamples
Download