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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1096
total RNA-seq
775
ChIP-seq
296
ATAC-seq
180
DNase-seq
180
single cell RNA-seq
31
pCHi-C
28
WGBS
28
snATAC-seq
19
Hi-C
16
small RNA-seq
11
RRBS
5
GRO-seq
4
FAIRE-seq
4
MeRIP-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
2
February, 2023
Organism
2
Homo sapiens
Biosample type
2
cell line
Project
2
T1D
Lab
2
Kyle Gaulton, UCSD
audit.ERROR.category!
inconsistent ontology term
biosample_type!
primary cell
month_released!
May, 2021
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
2 results
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HiChIP
cell line
EndoC_BH1
2