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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1815
ChIP-seq
1375
total RNA-seq
407
ATAC-seq
220
single cell RNA-seq
131
DNase-seq
85
RNA microarray
54
pCHi-C
30
Hi-C
snATAC-seq
28
WGBS
17
RRBS
17
small RNA-seq
10
MeRIP-seq
5
GRO-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Target of assay
5
control
5
nucleotide modification
Date released
10
November, 2020
Organism
10
Homo sapiens
Biosample type
6
cell line
4
tissue
Organ
10
pancreas
6
epithelium
Project
10
AMP
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_title!
snATAC-seq
lab.title!
Klaus Kaestner, Upenn
organ_slims!
kidney
ovary
BIOSAMPLE
ASSAY
10 results
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MeRIP-seq
cell line
EndoC_BH1
6
tissue
islet of Langerhans
4