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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ATAC-seq
49
total RNA-seq
41
WGBS
40
ChIP-seq
15
DNase-seq
6
MeRIP-seq
6
RRBS
4
Hi-C
4
single cell RNA-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
Assay category
41
DNA methylation
Target of assay
3
control
3
nucleotide modification
Date released
41
May, 2022
6
November, 2020
Available data
41
zippedFastqFolder
fastq
6
tsv
Organism
47
Homo sapiens
Biosample type
41
primary cell
6
cell line
Organ
51
pancreas
47
epithelium
8
heart
3
adipose tissue
3
connective tissue
3
liver
blood vessel
2
vasculature
1
limb
1
musculature of body
Project
41
HPAP
6
AMP
Lab
41
Klaus Kaestner, Upenn
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
files.file_type!
fastq
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
47 results
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WGBS
MeRIP-seq
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cell line
EndoC_BH1
6
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