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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1226
ChIP-seq
1221
total RNA-seq
250
ATAC-seq
176
DNase-seq
106
single cell RNA-seq
22
Hi-C
18
RRBS
18
small RNA-seq
4
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
0
MeRIP-seq
Assay category
106
Transcription
1
DNA accessibility
Target of assay
3
control
Date released
49
April, 2018
48
July, 2018
3
August, 2018
3
July, 2019
3
June, 2018
1
May, 2022
Available data
106
bam
106
bigWig
106
tsv
98
fastq
1
bed bed3+
1
txt
Organism
107
Homo sapiens
Biosample type
100
primary cell
7
tissue
Organ
80
pancreas
70
epithelium
4
connective tissue
3
brain
1
musculature of body
Project
107
AMP
Genome assembly (visualization)
107
hg19
106
GRCh38
Lab
107
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
1
audit script error
organ_slims!
vasculature
BIOSAMPLE
ASSAY
107 results
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single cell RNA-seq
snATAC-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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tissue
islet of Langerhans
6
skeletal muscle tissue
1
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