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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
1330
total RNA-seq
471
ATAC-seq
228
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
30
Hi-C
28
WGBS
21
RRBS
18
small RNA-seq
10
MeRIP-seq
8
snATAC-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
snDrop-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Assay category
1
DNA sequencing
Target of assay
5
control
5
nucleotide modification
Date released
10
November, 2020
1
August, 2021
Available data
1
vcf
Organism
11
Homo sapiens
Biosample type
7
cell line
4
tissue
Organ
10
pancreas
6
epithelium
1
liver
Project
11
AMP
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
11 results
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Clear Filters
MeRIP-seq
whole genome sequencing assay
cell line
EndoC_BH1
6
HepG2
1
tissue
islet of Langerhans
4
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