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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1375
ChIP-seq
1299
total RNA-seq
440
ATAC-seq
279
single cell RNA-seq
211
DNase-seq
87
RNA microarray
51
pCHi-C
36
snATAC-seq
28
WGBS
27
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
MeRIP-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
GRO-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Target of assay
control
5
nucleotide modification
Date released
5
November, 2020
Organism
5
Homo sapiens
Biosample type
3
cell line
2
tissue
Organ
5
pancreas
3
epithelium
Project
5
AMP
Lab
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
award.project!
HPAP
biosample_type!
in vitro differentiated cells
organ_slims!
bone marrow
target.investigated_as!
control
BIOSAMPLE
ASSAY
5 results
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MeRIP-seq
cell line
EndoC_BH1
3
tissue
islet of Langerhans
2