Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
993
total RNA-seq
725
ChIP-seq
476
ATAC-seq
367
single cell RNA-seq
209
DNase-seq
86
RNA microarray
84
snATAC-seq
69
WGBS
51
pCHi-C
30
Hi-C
21
RRBS
15
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
GRO-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Target of assay
5
control
5
nucleotide modification
Date released
10
November, 2020
Organism
10
Homo sapiens
Biosample type
6
cell line
4
tissue
Organ
10
pancreas
6
epithelium
Project
10
AMP
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
biosample_type!
in vitro differentiated cells
month_released!
October, 2017
organ_slims!
adipose tissue
target.investigated_as!
histone
BIOSAMPLE
ASSAY
10 results
search-icon
table-tab-icon
Clear Filters
MeRIP-seq
cell line
EndoC_BH1
6
tissue
islet of Langerhans
4