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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1586
ChIP-seq
1214
total RNA-seq
396
ATAC-seq
277
single cell RNA-seq
185
DNase-seq
85
RNA microarray
79
snATAC-seq
75
WGBS
25
Hi-C
21
RRBS
16
pCHi-C
7
small RNA-seq
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
FAIRE-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snDrop-seq
1
whole genome sequencing assay
Target of assay
3
control
3
nucleotide modification
Date released
6
November, 2020
Organism
6
Homo sapiens
Biosample type
6
cell line
Organ
6
epithelium
6
pancreas
Project
6
AMP
Lab
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
month_released!
December, 2019
May, 2021
replication_type!
anisogenic
BIOSAMPLE
ASSAY
6 results
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MeRIP-seq
cell line
EndoC_BH1
6