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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1790
ChIP-seq
970
total RNA-seq
503
ATAC-seq
351
single cell RNA-seq
210
DNase-seq
63
WGBS
57
snATAC-seq
53
pCHi-C
34
Hi-C
21
RRBS
15
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
RNA microarray
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
Transcription
Date released
February, 2021
5
August, 2021
2
December, 2019
1
March, 2023
Available data
2
tsv
Organism
7
Homo sapiens
Biosample type
6
cell line
2
tissue
Organ
4
kidney
2
liver
adipose tissue
1
connective tissue
1
epithelium
Project
7
AMP
1
community
Lab
5
Bing Ren, UCSD
2
AMP-T2D consortium
1
Anna Gloyn, Oxford
Audit category:
2
audit script error
1
inconsistent ontology term
month_released!
February, 2021
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
8 results
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STARR-seq
RNA microarray
shRNA RNA-seq
cell line
HEK293T
2
HepG2
2
EndoC-BH1
1
Synthesized DNA
1
tissue
kidney interstitium
1
renal glomerulus
1
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