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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1575
ChIP-seq
1438
total RNA-seq
526
ATAC-seq
353
single cell RNA-seq
207
DNase-seq
85
RNA microarray
66
WGBS
56
pCHi-C
45
snATAC-seq
30
Hi-C
18
small RNA-seq
15
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
84
February, 2021
6
August, 2021
Available data
84
txt
Organism
89
Homo sapiens
Biosample type
85
tissue
5
cell line
Organ
84
bone element
2
kidney
2
liver
1
adipose tissue
1
connective tissue
Project
90
AMP
Lab
85
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
85
inconsistent ontology term
audit script error
audit.ERROR.category!
audit script error
month_released!
August, 2017
organ_slims!
lung
BIOSAMPLE
ASSAY
90 results
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RNA microarray
STARR-seq
tissue
bone element
84
subcutaneous adipose tissue
1
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1
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