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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1858
ChIP-seq
1527
total RNA-seq
531
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
56
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
84
February, 2021
6
August, 2021
2
December, 2019
Available data
84
txt
2
tsv
Organism
91
Homo sapiens
Biosample type
87
tissue
5
cell line
Organ
84
bone element
4
kidney
2
liver
1
adipose tissue
1
connective tissue
1
epithelium
Project
92
AMP
Lab
87
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
85
inconsistent ontology term
2
audit script error
audit.WARNING.category!
inconsistent control run_type
organ_slims!
ovary
BIOSAMPLE
ASSAY
92 results
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RNA microarray
STARR-seq
tissue
bone element
84
kidney interstitium
1
renal glomerulus
1
subcutaneous adipose tissue
1
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1
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