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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
907
ChIP-seq
260
ATAC-seq
178
DNase-seq
175
single cell RNA-seq
85
RNA microarray
27
WGBS
26
snATAC-seq
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
27
DNA methylation
Date released
84
February, 2021
12
July, 2019
9
August, 2017
6
November, 2018
1
August, 2021
Available data
84
txt
17
bam
16
bed bedMethyl
16
bigBed bedMethyl
16
bigWig
10
fastq
Organism
111
Homo sapiens
Biosample type
112
tissue
47
primary cell
1
cell line
Organ
84
bone element
8
heart
7
adipose tissue
7
connective tissue
4
liver
4
pancreas
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
112
AMP
Genome assembly (visualization)
16
GRCh38
Lab
112
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
audit script error
assay_title!
total RNA-seq
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
112 results
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RNA microarray
WGBS
tissue
bone element
84
heart left ventricle
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
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